Inspired by a true classic - Lemon Drizzle Cake - these Easy Sourdough Lemon Muffins are a quick and delicious way to use up that sourdough discard to make a wonderful zingy treat with bright lemon flavor! Perfect for a sweet breakfast nibble or an afternoon snack to pack for a break at work, these sourdough muffins can also be turned into a decadent cupcake. Read on to see how to make them!

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If you are a beginner in baking with sourdough, chances are you will have a lot of discard whilst building your sourdough starter. The good news is, that sourdough discard recipes are quick and easy to make, and these Sourdough Lemon Muffins and our Sourdough Rhubarb Muffins are a great place to start - even if you are a novice baker! Or you can take it a step further and make our delicious Sourdough Lemon Cake with Poppy Seeds.
For more delicious treats, head to our article about Sourdough Recipes That Are Not Bread!
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Ingredients & Substitutes
- vegetable oil: can be substituted with other odourless oils, like sunflower or rapeseed oil. We tested this recipe with olive oil and found that the flavour of it was too strong for these muffins.
- caster sugar: or white granulated sugar.
- egg: use large eggs (UK) or extra-large (US).
- sourdough discard/ unfed starter: (100% hydration). The recipe works equally well with an active starter too!
- milk: dairy milk works best in this muffin recipe. But if you're looking to make dairy-free muffins, we found that cashew milk was the best alternative.
- plain flour (all-purpose flour): the recipe works with cake flour too.

- baking powder: not to be mixed up with bicarbonate of soda.
- salt.
- fresh lemons: since we are using zest as well as juice in this recipe, choose unwaxed lemons. If you have limes, however, use them instead (for more details refer to our Sourdough Lime Drizzle Cake recipe).
Equipment Needed: You will ideally need:
- Electric Handheld Mixer (we use and love Kenwood): you may also use a stand mixer with a paddle attachment.
- Large bowl
- Rubber spatula
- 12-hole muffin pan.
- Silicone or paper muffin liners.
- Lemon zester and lemon squeezer.
- Cooling rack
Variations
I get it, this is a basic recipe and you may want to introduce more pizzazz to these muffins. There are simple ways to make them even more delicious:
- A drop of vanilla extract goes a long way.
- Add a tablespoon of poppy seeds to make sourdough lemon poppy seed muffins that taste very similar to those you get at Starbucks!
- Have a glut of courgettes? Add some of it - just follow our Lemon and Poppy Seed Sourdough Zucchini Muffin recipe. Or try our fudgy chocolatey version - Sourdough Chocolate Zucchini Muffins.
- Make a tangy lemon glaze by mixing powdered sugar with lemon juice and drizzling it all over the sourdough muffins.
- Sprinkle the tops with coarse sugar for extra muffin top texture or make a crumb topping!
Sourdough Starter
Sourdough Discard is a perfect ingredient to use in lemon muffins since it adds that extra sour tang to the muffins that complements the zingy lemons. A few things to note regarding the sourdough starter:
- You can use an active sourdough starter if you wish, but it is not necessary as we are adding baking powder to help the muffins rise in the oven.
- Don't use an old sourdough starter. If it started forming a "sourdough hooch" (fermented alcohol on top of the sourdough starter), your muffins will be too sour and won't rise much in the oven.
- Use 100% hydration sourdough discard. That means that your starter would consist of 1 part water and 1 part flour.
Most sourdough bakers are looking for other ways, both sweet and savoury, to use up more of the never-ending sourdough discard. If it sounds like you, head to our Sourdough Discard Recipes! We have a bunch of delicious recipes, including Sourdough Discard Brownies, Sourdough Banana Bread Muffins and more...
Method
Preheat the oven to 180°C Fan. Place the cupcake liners into a 12-hole muffin tin (you may use silicone cupcake cases, or grease a muffin tin with butter, if it's a non-stick type).
In a mixing bowl, combine the vegetable oil, eggs and sugar and, using an electric handheld mixer, whisk until combined and the sugar dissolves. In a separate bowl, mix sourdough starter discard and milk. Then add the mixture to the eggs alongside the zest of a lemon and stir to combine.
In a separate bowl, mix the flour, baking powder and salt. Fold the flour mixture into the wet ingredients, taking care not to overmix. Divide the muffin batter into the lined muffin tin.
Bake for 20 minutes in the centre of the preheated oven. To check if the sourdough muffins are cooked, insert a wooden skewer or a cocktail stick into the centre. If cooked, it should come out clean. The tops should be lovely golden brown.


In a small bowl, combine the sugar and fresh lemon juice. Prick each muffin with a wooden skewer, then spoon the lemon drizzle onto the muffins and scatter the fresh lemon zest on top. After the drizzle has soaked in and hardened, remove the sourdough lemon muffins from the tin/cases and allow them to finish cooling on a wire rack. If you used paper liners, leave the muffins in them.
Recipe FAQs
Overmixing the batter is one of the most common culprits for tough and stodgy muffins. When you mix the wet and dry ingredients together, try to be gentle and fold, rather than beat. Only mix until there are no dry ingredients in sight and you will have fluffy sourdough lemon muffins in no time!
You can add a bunch of things to make these Sourdough Muffins even more delicious. Try adding some culinary lavender for a floral twist. Or some white chocolate chips for a sweeter more decadent muffin. Some dried or fresh blueberries or raspberries will work brilliantly in these delicious muffins too - but don't add more than 100g or your muffins will be too wet when baked.
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How To Store Sourdough Muffins?
After cooling the Lemon Muffins completely, store them in an airtight container for up to 4 days.
Alternatively, you can wrap leftover muffins individually in clingfilm (plastic wrap), place them in an airtight container and freeze them for up to 4 months. Defrost at room temperature - they will not have a crispy sugary top after defrosting but will still taste great!

Turn The Sourdough Lemon Muffins Into Cupcakes
After your muffins cool down, whip up a simple lemon frosting. Our favourite is Lemon Cream Cheese Frosting. You will need:
- 50g butter, softened
- 1 tbsp lemon juice
- a drop of lemon extract
- 50g icing sugar
- 100g cream cheese, ideally full fat, at room temperature
Using an electric hand mixer (we love Kenwood), beat the butter until pale and fluffy. Add the icing sugar and lemon juice and beat again until combined. Then add the cream cheese bit by bit and beat on slow speed until incorporated. Don't overbeat the frosting. Place it in the fridge for 15-20 minutes to firm up a little bit before piping it on top of your muffins to create lovely Sourdough Lemon Cupcakes!
Alternatively, try our Sourdough Discard Cupcakes With Cream Cheese Frosting!
Other Sourdough Discard Recipes
See our section of sourdough discard recipes for all of our favourite snacks and sweet treats that we make. The recipes below are a great way to put your discard to good use and introduce more sourdough goodness into your diet!
- Lemon Blueberry Sourdough Cake (Quick Discard Recipe)
- Sourdough Blueberry Pancakes (Made With Discard)
- Sourdough Cranberry Orange Muffins
- Lemon Poppy Seed Sourdough Scones
- Sourdough Cherry Scones With White Chocolate Chips
- Sourdough Rhubarb Cake (With Discard or Not)
- Sourdough Canelés
- Sourdough Banana Bread
- Sourdough Lime Drizzle Cake
And if you're looking to introduce similar flavours into your sourdough bread, head to our Lemon Poppy Seed Sourdough Bread recipe.

Easy Sourdough Lemon Muffins
Equipment
- Silicone Cupcake Cases or 12-hole muffin tin and liners
Ingredients
- 120 ml (½ cups) vegetable oil
- 140 g (1⅛ cups) caster sugar
- 2 eggs large
- 180 ml (¾ cups) milk
- 120 g (½ cups) sourdough discard/ unfed starter 100% hydration
- 190 g (1½ cups) plain flour
- 1½ teaspoon baking powder
- ½ teaspoon salt
- 1 lemon zest only
For The Drizzle:
- 1 (3-4 tablespoon) large lemon juice and zest
- 2 tablespoon caster sugar
Instructions
- Preheat the oven to 180°C Fan. Place the cupcake liners into a 12-hole muffin tin (or use silicone cupcake cases, or grease a muffin tin with butter, if it's a non-stick type).
- In a mixing bowl, combine the vegetable oil, eggs and sugar and, using an electric handheld mixer, beat until combined and sugar dissolves. In a separate bowl, mix sourdough starter discard and milk. Then add the mixture to the eggs alongside the zest of a lemon and stir to combine.
- In a separate bowl, mix the flour, baking powder and salt. Fold the dry ingredients into the wet ingredients, taking care not to overmix. Divide the batter between the muffin liners. If you have any batter leftover you can bake it in small greased ramekins.
- Bake for 20 minutes in the centre of the oven. To check if the sourdough muffins are cooked, instert a wooden skewer or a cocktail stick into the centre. If cooked, it should come out clean.
- In a small bowl, combine the sugar and juice of a lemon. Prick each muffin with a wooden skewer, then spoon the lemon drizzle onto the muffins and scatter the lemon zest on top. After the drizzle has soaked in and hardened, remove the sourdough lemon muffins from the tin/moulds and allow to finish cooling on wire rack. If you used paper liners, leave the muffins in them.
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Amanda Wren-Grimwood says
These come out so fluffy and they are the perfect size for snacking too. Really love the lemon flavour - definitely zingy!
Ieva says
Thanks, Amanda! Glad you enjoyed the lemony zinginess! 🙂
Lubna says
These look so soft and yum. Love the flavour of lemon in muffins. I never tried muffins with sour dough. Will surely try this recipe!
Casey says
You can't really go wrong with lemon muffins, and these sourdough muffins definitely did not disappoint! The kids and I ate the entire batch in 2 days. So good!
Ieva says
😀 These muffins never last more than 2 days in our house either - and we have no kids! 😀
Kim says
I loved these muffins, and after making the lemon drizzle for them, I made extra so that I could dip! I really wanted to eat it with a spoon...
Ieva says
You just taught me something new! I never tried dipping muffins into anything - I bet its delicious! 😀
Chenee says
So tasty and moist. I really enjoyed these. I'll be making them again on Mother's Day for brunch!
Ieva says
Thanks for trying this recipe! They are just perfect for Mother's Day!
Anita says
I want to make these in a couple days. I’m confused about the lemon quantity for the drizzle. It says “1 1/2 lemon and zest” Is that the juice of 1 and 1/2 lemons? Because then the directions say “juice of one lemon.”
Thanks for your help. I can’t wait to taste these.
Ieva Greber says
Hi there! So sorry about the confusion — thank you for spotting that.
For the drizzle, you’ll need about 3–4 tablespoons of lemon juice, which usually works out to the juice of about 1 to 1½ lemons, depending on their size. The lemon zest is just for decorating the tops.
Make sure to zest your lemons before squeezing them (I’ve forgotten plenty of times, and it’s a real nightmare trying to zest squashed lemons!).
Hope that helps, and I’m so glad you’re planning to make the muffins 🙂