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    Home » SOURDOUGH » SOURDOUGH DISCARD

    Sourdough Pumpkin Muffins (Made With Discard)

    Published: October 2, 2025 · Updated: October 2, 2025 by Ieva Greber · This post may contain affiliate links · Leave a Comment

    Jump to Recipe Jump to Video Print Recipe

    Autumn in a bite! These Sourdough Pumpkin Muffins are the perfect way to make use of your leftover sourdough discard while celebrating the cosy, spiced flavours of fall. With tender crumb, warm spices, and a sweet streusel topping, these pumpkin sourdough muffins are ideal for a make-ahead breakfast, brunch, or an afternoon pick-me-up.

    A batch of sourdough pumpkin muffins on a decorative wooden board with one muffin cut in half.
    Jump to:
    • Sourdough In Pumpkin Muffins
    • Ingredient Notes
    • Why Use Both Baking Soda and Baking Powder?
    • Step-By-Step Method
    • Recipe Tips For Best Results
    • Storage
    • More Sourdough Discard Recipes
    • Sourdough Pumpkin Muffins With Streusel Topping

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    Sourdough In Pumpkin Muffins

    Using extra sourdough starter in your muffins is more than just a clever way to reduce waste. Here's why it works so well:

    ✅ Tangy balance. The mild acidity of the discard balances the sweetness of the sugars, creating a well-rounded flavour. Works beautifully in our Sourdough Cranberry Orange Muffins too!

    ✅ Tender and moist crumb. Acidity interacts with the fats and liquids in the batter to keep the muffins soft and moist for longer.

    ✅ Shelf life extended. The natural acids slow down staling, making these muffins stay fresher for a few extra days.

    ✅ Waste not. Using leftover sourdough discard is a great way to avoid throwing away your active starter, giving it a new life in pumpkin bakes.

    ✅ Depth of flavour. The sourdough adds subtle complexity that pairs perfectly with pumpkin pie spice.

    For more pumpkin + sourdough creations, head to our Pumpkin Sourdough Recipes (From Bread To Sweet Treats).

    Ingredient Notes

    Here are a few simple ingredients you will need to make these Pumpkin Sourdough Discard Muffins:

    • Plain flour / all-purpose flour. All-purpose flour works well; no need for lower-gluten cake flour. 
    • Canned Pumpkin puree. Use pure pumpkin puree or homemade pumpkin purée; avoid pumpkin pie filling as it is already sweetened and spiced.

    Have more pumpkin and sourdough starter? Try our Sourdough Pumpkin Focaccia with Herbs de Provence or our Sweet Sourdough Pumpkin Focaccia and Sourdough Pumpkin Scones next!

    • Sourdough discard.  Best when not overly acidic or forming hooch; too sour and the muffins will taste tangy.
    • Sugars. Brown sugar adds warmth and moisture, white sugar adds sweetness and lift. You can replace some with maple syrup if desired.
    • Vegetable oil / melted coconut oil / avocado oil. Any neutral oil works; it ensures a fluffy texture and tender crumb.
    • Eggs & milk. Use room temperature ingredients for easier incorporation.
    • Mixed spice (UK)/ Pumpkin pie spice (US). You can mix cinnamon, nutmeg, ginger, and cloves if you don't have a pre-made blend.
    • Streusel topping. Optional but highly recommended; adds crunch and extra sweetness (you will need flour, granulated sugar, salt and unsalted butter for that). 
    Ingredients for Sourdough Discard Pumpkin Muffins With labels.

    As always, find ingredient quantities, detailed instructions and nutritional information in the recipe card at the bottom of the post. 

    Why Use Both Baking Soda and Baking Powder?

    Baking powder provides the initial rise when combined with wet ingredients. Baking soda reacts with the natural acidity in the sourdough discard, helping the muffins rise further and ensuring a light, airy texture. Your discard alone doesn't have enough leavening, so both agents are essential for fluffy sourdough pumpkin muffins.

    Step-By-Step Method

    1. Preheat & Prepare. Preheat the oven to 200°C and line a 12-hole muffin tin with muffin liners or cupcake liners (or coat your muffin pan with cooking spray)

    2. Dry Ingredients. In a medium bowl, combine plain flour, baking powder, baking soda, salt, and pumpkin pie spice.

    Dry ingredeints being mixed in a large metal bowl.

    3. Wet Ingredients. In another large mixing bowl, whisk together pumpkin puree, vegetable oil, sourdough discard, both sugars, milk and eggs until smooth using a hand mixer or stand mixer.

    Wet ingredeints about to be whisked with a handheld electric mixer in a large mixing bowl.

    4. Combine. Gently fold the dry ingredients into the wet mixture with a rubber spatula until just combined. The muffin batter should be thick but pourable; do not overmix.

    5. Streusel Topping. Mix flour, sugar, and salt; rub in cold cubed butter until coarse crumbs form. Stir in pumpkin seeds if using.

    6. Assemble. Divide muffin batter evenly into muffin cups, almost to the top, then sprinkle generously with streusel. Press lightly to help it stick.

    Sourdough pumpkin muffin batter in paper liners.
    Streusel topping with pumpkin seeds on top of the muffin batter.

    7. Bake. Bake the muffins for 22-28 minutes until a wooden skewer inserted into the centre of the muffin comes out clean (I bake regular muffins for 22 minutes, but if I make 8 tall muffins in tulip cakes (as photographed), it takes about 27-28 minutes). Cool baked muffins on a wire rack before tucking in.

    Sourdough pumpkin muffin on a wooden board with a bite missing.

    Recipe Tips For Best Results

    • Use sourdough discard that isn't too old or overly acidic. Discard that's forming hooch on top will produce unpleasantly sour muffins. 
    • If you have some spare active sourdough starter, you can use it instead, as the batter isn't long fermented. 
    • Do not overmix after adding dry ingredients; this preserves the fluffy texture.
    • Room temperature wet ingredients combine more easily, giving a smoother batter.
    • Bake shortly after mixing, as baking soda loses leavening power over time.
    • Press the streusel topping gently so it adheres but doesn't compress the muffins.
    • For a richer fall flavour, you can fold in mini chocolate chips or swirl in cream cheese before baking.
    • If using homemade pumpkin puree with higher water content, slightly reduce milk to maintain proper consistency.

    Fancy turning this great recipe into a sourdough discard pumpkin bread?

    Storage

    ROOM TEMPERATURE: Store cooled muffins in an airtight container for up to 3 days.

    FREEZING: For longer storage, freeze whole muffins wrapped in plastic wrap (cling film) in a freezer-safe bag for up to 3 months. Thaw and reheat in a low oven for 2-3 minutes or microwave for a few seconds, if you wish. 

    Sourdough pumpkin muffin on a wooden board with a bite missing.

    More Sourdough Discard Recipes

    These sourdough discard pumpkin muffins are just one of many ways to use leftover starter. There are plenty of other sourdough discard recipes perfect for breakfast, snacks, or a cosy afternoon treat.

    • Baked sourdough raspberry and white chocolate sourdough cookies on a piece of parchment paper.
      Sourdough White Chocolate Raspberry Cookies
    • Stacks of butter pacan sourdough cookies on a decorative wooden board with one sourdough cookie already bitten into.
      Chewy Sourdough Butter Pecan Cookies
    • A bitten into sourdough chocolate chip and pretzel cookie on a decorative wooden board with more sourdough cookies in the background.
      Sourdough Chocolate Chip Pretzel Cookies
    • Savoury Mediterranean sourdough zucchini bread loaf with olives and sundried tomatoes sliced on a black slate board.
      Mediterranean Sourdough Courgette Loaf (Olives, Sun-Dried Tomato & Parmesan)
    A batch of sourdough pumpkin muffins on a decorative wooden board with one muffin cut in half.

    Sourdough Pumpkin Muffins With Streusel Topping

    Autumn in a bite! These Sourdough Pumpkin Muffins are the perfect way to make use of your leftover sourdough discard while celebrating the cosy, spiced flavours of fall. With tender crumb, warm spices, and a sweet streusel topping, these pumpkin sourdough muffins are ideal for a make-ahead breakfast, brunch, or an afternoon pick-me-up.
    5 from 6 votes
    Prevent your screen from going dark
    Print Recipe Pin Recipe
    Prep Time 20 minutes mins
    Cook Time 30 minutes mins
    Total Time 50 minutes mins
    Course Breakfast, Dessert, Snack
    Cuisine American, Sourdough
    Servings 12 muffins (or 8 tall tulip muffins)
    Calories 322 kcal

    Equipment

    • 12-Hole Muffin Tin
    • Muffin Liners
    • Electric Handheld Mixer
    • Rubber Spatula

    Ingredients
     

    • 200 g (1.6 cups) plain flour all-purpose flour
    • 1½ tablespoon mixed spice or pumpkin pie spice
    • ¾ teaspoon salt
    • ¼ teaspoon bicarbonate of soda a.k.a. baking soda
    • 1½ teaspoon baking powder
    • 240 g (1 cups) pumpkin puree
    • 100 g (½ cup) vegetable oil
    • 100 g (½ cups) sourdough discard 100% hydration
    • 100 g (⅔ cups) caster sugar or granulated sugar
    • 100 g (½ cups) light brown sugar
    • 60 g (¼ cups) milk
    • 2 eggs large

    For Streusel Topping:

    • 70 g (½ cups) plain flour a.k.a. all-purpose flour
    • 70 g (½ cups) granulated or caster sugar
    • a pinch of salt
    • 50 g (1.76 oz) butter cold, cubed
    • 2 tablespoon pumpkin seed optional

    Instructions
     

    • Preheat the oven to 200°C (400°F). Line a 12-hole muffin tin with muffin liners.
    • In a large bowl, combine flour, baking powder, baking soda, spices and salt.
    • In a separate large mixing bowl, combine pumpkin puree, vegetable oil, sourdough discard, both types of sugar, milk, and eggs. Using an electric handheld mixer, beat the mixture for 1-2 minutes until well combined and increased in volume.
    • Add the flour mixture to the wet ingredients and, using a rubber spatula, gently fold everything together. Avoid overmixing.

    Make Streusel Topping

    • In a medium bowl, mix the sugar, flour and a pinch of salt. Add the cubed butter and rub with your fingertips until the mixture resembles coarse breadcrumbs. If using pumpkin seeds, stir them in at the end.

    Assemble and Bake

    • Spoon the sourdough pumpkin muffin batter into the muffin cases, filling them almost all the way to the top.
    • Spoon plenty of streusel mixture over the top of each muffin.
    • Bake the muffins for 22-28 minutes until a wooden skewer inserted into the centre of the muffin comes out clean (I bake regular muffins for 22 minutes, but if I make 8 tall muffins in tulip cakes (as photograpghed), it takes about 27-28 minutes).
    • Remove the muffins from the tin and let them cool down to room temperature.

    Video

    Nutrition

    Calories: 322kcalCarbohydrates: 44gProtein: 4gFat: 15gSaturated Fat: 4gPolyunsaturated Fat: 6gMonounsaturated Fat: 4gTrans Fat: 0.2gCholesterol: 36mgSodium: 265mgPotassium: 101mgFiber: 1gSugar: 23gVitamin A: 3268IUVitamin C: 1mgCalcium: 62mgIron: 2mg
    Keyword Pumpkin Sourdough Muffins, Sourdough Discard Muffins, Sourdough Discard Pumpkin Muffins, Sourdough Muffins, Sourdough Pumpkin Muffins
    Tried this recipe?Let us know how it was!
    Sourdough pumpkin muffins with streusel topping with one muffin cut in half. Pin for Pinterest.

    More SOURDOUGH DISCARD

    • Sourdough Scarpaccia cut into squares on a wooden board.
      Sourdough Discard Courgette (Zucchini) Scarpaccia
    • Raspberry and White Chocolate Sourdough Scones arranged on a wooden board with one broken in half exposing fruity chocolatey interior.
      Sourdough Raspberry White Chocolate Scones
    • Sourdough Chocolate Zucchini Muffins on a black board with one torn in half expising chocolate-chip studded interior.
      Sourdough Chocolate Zucchini Muffins (Double Chocolate Courgette Muffins)
    • Sourdough Raspberry and White Chocolate Cupckaes with white chocolate cream cheese frosting arranged on a wooden board.
      Raspberry White Chocolate Sourdough Cupcakes
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    Author of the blog holding a fork with spaghetti on it.

    Hi, I am Ieva – the cook and baker in our North Wales home. I share my life with my husband Seb, who doubles as my number-one taste tester, our golden retriever Sawyer, who’s always on crumb patrol and multiple sourdough starters. My days revolve around food—whether I’m experimenting with new recipes, tending to my veggie garden, or sneaking bites of “taste tests” (quality control, of course). Cooking isn’t just a passion; it’s my way of keeping Seb from reaching ‘hangry’ levels! Somebody HAS to feed Seb…

    More about me →

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